Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1757318 bp
Thymine Count
1765928 bp
Guanine Count
1120783 bp
Cytosine Count
1109922 bp
Genome Length
5755101 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dna polymerase iii, delta subunit | SAMN05421827_108127 | Not Available | - | 2816703 - 2817722 | 38594.7 |
| type i restriction enzyme r protein n terminus (hsdr_n) | SAMN05421827_108128 | Not Available | + | 2818025 - 2818483 | 17791.0 |
| predicted dehydrogenase | SAMN05421827_108129 | Not Available | - | 2818798 - 2819991 | 44358.4 |
| protein of unknown function | SAMN05421827_108130 | Not Available | - | 2820243 - 2821607 | 50227.9 |
| predicted dehydrogenase | SAMN05421827_108131 | Not Available | - | 2821704 - 2823059 | 50473.9 |
| valyl-trna synthetase | SAMN05421827_108132 | Not Available | - | 2823308 - 2825974 | 102486.0 |
| endonuclease, uma2 family (restriction endonuclease fold) | SAMN05421827_108133 | Not Available | - | 2826241 - 2826876 | 24138.9 |
| endonuclease, uma2 family (restriction endonuclease fold) | SAMN05421827_108134 | Not Available | - | 2826923 - 2827555 | 23955.8 |
| cd2+/zn2+-exporting atpase | SAMN05421827_108135 | Not Available | - | 2827697 - 2829685 | 71992.8 |
| putative endopeptidase | SAMN05421827_108136 | Not Available | + | 2830046 - 2832079 | 75843.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
