Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter terrae
Accession NumberFNCH00000000.1
Gene Summary
Adenine Count
1757318 bp
Thymine Count
1765928 bp
Guanine Count
1120783 bp
Cytosine Count
1109922 bp
Genome Length
5755101 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421827_108107 | Not Available | - | 2796043 - 2796627 | 21520.2 |
| predicted rna-binding protein, contains pua-like domain | SAMN05421827_108108 | Not Available | - | 2796884 - 2797291 | 15565.5 |
| predicted atp-binding protein involved in virulence | SAMN05421827_108109 | Not Available | + | 2797718 - 2798884 | 45444.9 |
| protein of unknown function | SAMN05421827_108110 | Not Available | + | 2798885 - 2799925 | 41556.8 |
| protein of unknown function duf262 | SAMN05421827_108111 | Not Available | + | 2799912 - 2801792 | 75229.1 |
| hypothetical protein | SAMN05421827_108112 | Not Available | + | 2801869 - 2802333 | 20452.8 |
| rep element-mobilizing transposase rayt | SAMN05421827_108113 | Not Available | + | 2802827 - 2803372 | 21514.8 |
| rep element-mobilizing transposase rayt | SAMN05421827_108114 | Not Available | + | 2803700 - 2804245 | 21543.0 |
| hypothetical protein | SAMN05421827_108115 | Not Available | + | 2804373 - 2805323 | 36023.2 |
| hypothetical protein | SAMN05421827_108116 | Not Available | - | 2805289 - 2805525 | 9218.33 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.