Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter terrae
Accession NumberFNCH00000000.1
Gene Summary
Adenine Count
1757318 bp
Thymine Count
1765928 bp
Guanine Count
1120783 bp
Cytosine Count
1109922 bp
Genome Length
5755101 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| rrf2 family protein | SAMN05421827_10897 | Not Available | - | 2782130 - 2782540 | 14835.8 |
| atp-binding cassette, subfamily f, member 3 | SAMN05421827_10898 | Not Available | + | 2783053 - 2785011 | 73912.3 |
| protein of unknown function | SAMN05421827_10899 | Not Available | + | 2785569 - 2786846 | 49501.9 |
| formylglycine-generating enzyme, required for sulfatase activity, contains sumf1/fge domain | SAMN05421827_108100 | Not Available | + | 2787914 - 2788879 | 36697.4 |
| tat (twin-arginine translocation) pathway signal sequence | SAMN05421827_108101 | Not Available | + | 2788917 - 2790236 | 49002.1 |
| thiamine biosynthesis lipoprotein | SAMN05421827_108102 | Not Available | + | 2790243 - 2791241 | 36859.0 |
| hydroxypyruvate isomerase | SAMN05421827_108103 | Not Available | + | 2791262 - 2792188 | 34596.2 |
| alpha-amylase | SAMN05421827_108104 | Not Available | - | 2792411 - 2793898 | 56651.1 |
| acyl-coa hydrolase | SAMN05421827_108105 | Not Available | + | 2794271 - 2794792 | 19363.4 |
| nhap-type na+/h+ or k+/h+ antiporter | SAMN05421827_108106 | Not Available | + | 2794863 - 2796053 | 43738.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.