Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter terrae
Accession NumberFNCH00000000.1
Gene Summary
Adenine Count
1757318 bp
Thymine Count
1765928 bp
Guanine Count
1120783 bp
Cytosine Count
1109922 bp
Genome Length
5755101 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tryptophan-rich sensory protein | SAMN05421827_10887 | Not Available | + | 2771459 - 2771932 | 18134.9 |
| nte family protein | SAMN05421827_10888 | Not Available | + | 2771982 - 2774279 | 87002.8 |
| hypothetical protein | SAMN05421827_10889 | Not Available | + | 2774276 - 2774806 | 19788.5 |
| 2'-5' rna ligase | SAMN05421827_10890 | Not Available | + | 2775417 - 2775983 | 22229.9 |
| outer membrane protein assembly factor bama | SAMN05421827_10891 | Not Available | - | 2775984 - 2778413 | 92296.2 |
| rna methyltransferase, trmh family | SAMN05421827_10892 | Not Available | + | 2778467 - 2779144 | 24808.3 |
| Trna-cys | Not Available | Not Available | + | 2779214 - 2779287 | Not Available |
| hypothetical protein | SAMN05421827_10894 | Not Available | + | 2779322 - 2779492 | 6257.59 |
| dihydroorotate dehydrogenase | SAMN05421827_10895 | Not Available | - | 2780108 - 2781202 | 40843.6 |
| hypothetical protein | SAMN05421827_10896 | Not Available | - | 2781407 - 2782057 | 23089.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.