Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter terrae
Accession NumberFNCH00000000.1
Gene Summary
Adenine Count
1757318 bp
Thymine Count
1765928 bp
Guanine Count
1120783 bp
Cytosine Count
1109922 bp
Genome Length
5755101 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421827_10867 | Not Available | - | 2739408 - 2740667 | 45336.9 |
| tonb-dependent receptor | SAMN05421827_10868 | Not Available | - | 2740690 - 2743464 | 103497.0 |
| tetratricopeptide repeat-containing protein | SAMN05421827_10869 | Not Available | - | 2743725 - 2745329 | 61814.1 |
| abc-2 type transport system atp-binding protein | SAMN05421827_10870 | Not Available | + | 2746581 - 2747276 | 25121.5 |
| iron complex outermembrane recepter protein | SAMN05421827_10871 | Not Available | + | 2747290 - 2749797 | 93748.3 |
| abc-2 type transport system permease protein | SAMN05421827_10872 | Not Available | + | 2749797 - 2751242 | 54438.4 |
| abc-2 type transport system permease protein | SAMN05421827_10873 | Not Available | + | 2751250 - 2752611 | 52423.0 |
| dna-binding transcriptional regulator, lrp family | SAMN05421827_10874 | Not Available | - | 2752963 - 2753430 | 17936.0 |
| cysteine synthase a | SAMN05421827_10875 | Not Available | + | 2753626 - 2754672 | 37825.8 |
| disulphide bond corrector protein dsbc | SAMN05421827_10876 | Not Available | + | 2754696 - 2755145 | 16576.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.