Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter terrae
Accession NumberFNCH00000000.1
Gene Summary
Adenine Count
1757318 bp
Thymine Count
1765928 bp
Guanine Count
1120783 bp
Cytosine Count
1109922 bp
Genome Length
5755101 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421827_10847 | Not Available | + | 2715211 - 2716518 | 44806.6 |
| hypothetical protein | SAMN05421827_10848 | Not Available | + | 2716615 - 2717715 | 40099.2 |
| hypothetical protein | SAMN05421827_10849 | Not Available | + | 2718033 - 2718293 | 9481.9 |
| dna-binding transcriptional regulator, acrr family | SAMN05421827_10850 | Not Available | - | 2718265 - 2718888 | 24009.5 |
| hypothetical protein | SAMN05421827_10851 | Not Available | + | 2719016 - 2719303 | 10637.4 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05421827_10852 | Not Available | + | 2719300 - 2722500 | 118404.0 |
| starch-binding associating with outer membrane | SAMN05421827_10853 | Not Available | + | 2722511 - 2723968 | 54854.9 |
| type i phosphodiesterase / nucleotide pyrophosphatase | SAMN05421827_10854 | Not Available | + | 2724050 - 2725285 | 47060.7 |
| pap2 superfamily protein | SAMN05421827_10855 | Not Available | - | 2725358 - 2726299 | 36280.7 |
| fatty acid hydroxylase superfamily protein | SAMN05421827_10856 | Not Available | - | 2726301 - 2726921 | 24680.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.