Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter terrae
Accession NumberFNCH00000000.1
Gene Summary
Adenine Count
1757318 bp
Thymine Count
1765928 bp
Guanine Count
1120783 bp
Cytosine Count
1109922 bp
Genome Length
5755101 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| n utilization substance protein b | SAMN05421827_10817 | Not Available | - | 2675597 - 2676547 | 36962.8 |
| leucine dehydrogenase | SAMN05421827_10818 | Not Available | - | 2676598 - 2677686 | 39273.3 |
| atp-binding cassette, subfamily b | SAMN05421827_10819 | Not Available | + | 2678340 - 2680130 | 67877.9 |
| protein of unknown function | SAMN05421827_10820 | Not Available | + | 2680210 - 2680533 | 12749.7 |
| hypothetical protein | SAMN05421827_10821 | Not Available | - | 2680602 - 2681066 | 16875.0 |
| hypothetical protein | SAMN05421827_10822 | Not Available | + | 2681266 - 2682366 | 40118.0 |
| putative hydrolase of the had superfamily | SAMN05421827_10823 | Not Available | - | 2683114 - 2683728 | 23831.5 |
| magnesium transporter | SAMN05421827_10824 | Not Available | - | 2683738 - 2685114 | 51565.6 |
| dna-binding response regulator, lytr/algr family | SAMN05421827_10825 | Not Available | + | 2685457 - 2686197 | 28447.2 |
| Trna-arg | Not Available | Not Available | + | 2686423 - 2686494 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.