Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter terrae
Accession NumberFNCH00000000.1
Gene Summary
Adenine Count
1757318 bp
Thymine Count
1765928 bp
Guanine Count
1120783 bp
Cytosine Count
1109922 bp
Genome Length
5755101 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| phosphomannomutase | SAMN05421827_1087 | Not Available | - | 2667252 - 2668637 | 49986.0 |
| methyltransferase domain-containing protein | SAMN05421827_1088 | Not Available | + | 2668852 - 2669709 | 33708.6 |
| undecaprenyl-diphosphatase | SAMN05421827_1089 | Not Available | + | 2669706 - 2670269 | 21526.9 |
| zinc transporter zupt | SAMN05421827_10810 | Not Available | + | 2670273 - 2670989 | 26337.0 |
| endonuclease, uma2 family (restriction endonuclease fold) | SAMN05421827_10811 | Not Available | + | 2671143 - 2671736 | 22976.2 |
| putative mrna 3-end processing factor | SAMN05421827_10812 | Not Available | - | 2672080 - 2673024 | 35883.0 |
| dephospho-coa kinase | SAMN05421827_10813 | Not Available | - | 2673070 - 2673687 | 22818.7 |
| ybbr domain-containing protein | SAMN05421827_10814 | Not Available | - | 2673687 - 2674634 | 36106.9 |
| preprotein translocase subunit yajc | SAMN05421827_10815 | Not Available | - | 2674753 - 2675073 | 11507.4 |
| protein of unknown function | SAMN05421827_10816 | Not Available | - | 2675136 - 2675594 | 16067.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.