Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter terrae
Accession NumberFNCH00000000.1
Gene Summary
Adenine Count
1757318 bp
Thymine Count
1765928 bp
Guanine Count
1120783 bp
Cytosine Count
1109922 bp
Genome Length
5755101 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| protease-4 | SAMN05421827_107232 | Not Available | - | 2643997 - 2645763 | 64888.0 |
| 2-amino-4-hydroxy-6- hydroxymethyldihydropteridinediphosphokinase | SAMN05421827_107233 | Not Available | + | 2645807 - 2646310 | 18701.8 |
| cdp-diacylglycerol---serine o-phosphatidyltransferase | SAMN05421827_107234 | Not Available | - | 2646415 - 2647107 | 25574.8 |
| transcription termination factor rho | SAMN05421827_107235 | Not Available | - | 2647195 - 2648949 | 65068.3 |
| orotidine-5'-phosphate decarboxylase | SAMN05421827_107236 | Not Available | + | 2649373 - 2650203 | 30736.7 |
| hypothetical protein | SAMN05421827_107237 | Not Available | + | 2651043 - 2651276 | 8693.25 |
| hypothetical protein | SAMN05421827_107238 | Not Available | + | 2651267 - 2651593 | 13007.7 |
| protein of unknown function | SAMN05421827_107239 | Not Available | + | 2651630 - 2652913 | 49176.4 |
| hypothetical protein | SAMN05421827_107240 | Not Available | + | 2652965 - 2653180 | 8410.07 |
| hypothetical protein | SAMN05421827_107241 | Not Available | + | 2653311 - 2653529 | 8691.87 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.