Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter terrae
Accession NumberFNCH00000000.1
Gene Summary
Adenine Count
1757318 bp
Thymine Count
1765928 bp
Guanine Count
1120783 bp
Cytosine Count
1109922 bp
Genome Length
5755101 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421827_107202 | Not Available | - | 2616730 - 2617092 | 13827.6 |
| rna polymerase primary sigma factor | SAMN05421827_107203 | Not Available | - | 2617264 - 2618124 | 32636.0 |
| hypothetical protein | SAMN05421827_107204 | Not Available | + | 2618542 - 2619099 | 20908.4 |
| putative transcriptional regulator | SAMN05421827_107205 | Not Available | + | 2619139 - 2619345 | 7573.58 |
| succinyl-coa synthetase beta subunit | SAMN05421827_107206 | Not Available | - | 2619673 - 2620872 | 43135.9 |
| hypothetical protein | SAMN05421827_107207 | Not Available | - | 2621307 - 2621618 | 11137.1 |
| msep-cterm protein | SAMN05421827_107208 | Not Available | - | 2621718 - 2624126 | 91500.6 |
| hypothetical protein | SAMN05421827_107209 | Not Available | - | 2624087 - 2624557 | 18316.1 |
| exosortase k | SAMN05421827_107210 | Not Available | - | 2624541 - 2625074 | 20467.1 |
| protein of unknown function | SAMN05421827_107211 | Not Available | - | 2625078 - 2626637 | 59602.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.