Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter terrae
Accession NumberFNCH00000000.1
Gene Summary
Adenine Count
1757318 bp
Thymine Count
1765928 bp
Guanine Count
1120783 bp
Cytosine Count
1109922 bp
Genome Length
5755101 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| substrate-binding protein | SAMN05421827_107192 | Not Available | + | 2608418 - 2609221 | 30588.3 |
| hypothetical protein | SAMN05421827_107193 | Not Available | + | 2609331 - 2609633 | 10643.1 |
| Trna-leu | Not Available | Not Available | + | 2610040 - 2610124 | Not Available |
| Trna-leu | Not Available | Not Available | + | 2610622 - 2610706 | Not Available |
| trigger factor | SAMN05421827_107196 | Not Available | + | 2610804 - 2612231 | 54085.1 |
| four helix bundle protein | SAMN05421827_107197 | Not Available | + | 2612313 - 2612672 | 13670.4 |
| atp-dependent clp protease, protease subunit | SAMN05421827_107198 | Not Available | + | 2612682 - 2613434 | 27841.4 |
| atp-dependent clp protease atp-binding subunit clpx | SAMN05421827_107199 | Not Available | + | 2613418 - 2614656 | 46025.9 |
| amp nucleosidase | SAMN05421827_107200 | Not Available | + | 2614711 - 2615601 | 32814.0 |
| abc-type lipopolysaccharide export system, atpase component | SAMN05421827_107201 | Not Available | - | 2616128 - 2616787 | 24957.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.