Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter terrae
Accession NumberFNCH00000000.1
Gene Summary
Adenine Count
1757318 bp
Thymine Count
1765928 bp
Guanine Count
1120783 bp
Cytosine Count
1109922 bp
Genome Length
5755101 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dna-binding transcriptional response regulator, ntrc family, contains rec, aaa-type atpase, and a fis-type dna-binding domains | SAMN05421827_107182 | Not Available | - | 2591404 - 2592774 | 51551.6 |
| hlyd family secretion protein | SAMN05421827_107183 | Not Available | + | 2593012 - 2594256 | 46386.6 |
| hypothetical protein | SAMN05421827_107184 | Not Available | + | 2594213 - 2594404 | 7597.54 |
| putative abc transport system atp-binding protein | SAMN05421827_107185 | Not Available | + | 2594401 - 2595099 | 25954.2 |
| ftsx-like permease family protein | SAMN05421827_107186 | Not Available | + | 2595342 - 2597711 | 88336.2 |
| putative abc transport system permease protein | SAMN05421827_107187 | Not Available | + | 2597793 - 2600168 | 87975.5 |
| abc-type antimicrobial peptide transport system, permease component | SAMN05421827_107188 | Not Available | + | 2600259 - 2602631 | 88392.0 |
| ftsx-like permease family protein | SAMN05421827_107189 | Not Available | + | 2602721 - 2605102 | 87898.1 |
| putative abc transport system permease protein | SAMN05421827_107190 | Not Available | + | 2605180 - 2607606 | 91364.9 |
| abc-type lipoprotein export system, atpase component | SAMN05421827_107191 | Not Available | + | 2607680 - 2608363 | 25310.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.