Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter terrae
Accession NumberFNCH00000000.1
Gene Summary
Adenine Count
1757318 bp
Thymine Count
1765928 bp
Guanine Count
1120783 bp
Cytosine Count
1109922 bp
Genome Length
5755101 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| l-2,4-diaminobutyrate decarboxylase | SAMN05421827_107162 | Not Available | - | 2564005 - 2565546 | 57918.3 |
| iron complex outermembrane recepter protein | SAMN05421827_107163 | Not Available | + | 2565880 - 2568315 | 87785.4 |
| hypothetical protein | SAMN05421827_107164 | Not Available | - | 2568465 - 2569685 | 45975.0 |
| rrf2 family protein | SAMN05421827_107165 | Not Available | + | 2569955 - 2570401 | 16360.2 |
| hypothetical protein | SAMN05421827_107166 | Not Available | - | 2570643 - 2571011 | 14417.5 |
| hypothetical protein | SAMN05421827_107167 | Not Available | - | 2571014 - 2571244 | 8719.38 |
| sulfite reductase (ferredoxin) | SAMN05421827_107168 | Not Available | + | 2571950 - 2574040 | 78102.3 |
| uroporphyrin-iii c-methyltransferase | SAMN05421827_107169 | Not Available | + | 2574178 - 2574948 | 27183.1 |
| hypothetical protein | SAMN05421827_107170 | Not Available | + | 2574932 - 2576443 | 54755.9 |
| phosphoadenosine phosphosulfate reductase | SAMN05421827_107171 | Not Available | + | 2576446 - 2577147 | 27192.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.