Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter terrae
Accession NumberFNCH00000000.1
Gene Summary
Adenine Count
1757318 bp
Thymine Count
1765928 bp
Guanine Count
1120783 bp
Cytosine Count
1109922 bp
Genome Length
5755101 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ribosomal protein l7/l12 | SAMN05421827_107152 | Not Available | + | 2552206 - 2552673 | 17086.0 |
| hypothetical protein | SAMN05421827_107153 | Not Available | + | 2552762 - 2553046 | 10408.4 |
| hypothetical protein | SAMN05421827_107154 | Not Available | + | 2553507 - 2553656 | 5440.63 |
| unsaturated rhamnogalacturonyl hydrolase | SAMN05421827_107155 | Not Available | + | 2553822 - 2554622 | 29685.6 |
| protein of unknown function | SAMN05421827_107156 | Not Available | - | 2554695 - 2555258 | 21423.6 |
| fad-nad(p)-binding | SAMN05421827_107157 | Not Available | + | 2555856 - 2557559 | 64090.9 |
| peptidase family m23 | SAMN05421827_107158 | Not Available | - | 2557570 - 2558196 | 24316.2 |
| siderophore synthetase component | SAMN05421827_107159 | Not Available | - | 2558376 - 2560316 | 74255.6 |
| lysine n6-hydroxylase | SAMN05421827_107160 | Not Available | - | 2560255 - 2561601 | 51060.8 |
| siderophore synthetase component | SAMN05421827_107161 | Not Available | - | 2561601 - 2564060 | 94147.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.