Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter terrae
Accession NumberFNCH00000000.1
Gene Summary
Adenine Count
1757318 bp
Thymine Count
1765928 bp
Guanine Count
1120783 bp
Cytosine Count
1109922 bp
Genome Length
5755101 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide a dehydrogenase | SAMN05421827_107142 | Not Available | + | 2542608 - 2543627 | 36712.6 |
| transcriptional regulatory protein, c terminal | SAMN05421827_107143 | Not Available | - | 2543824 - 2544669 | 32145.4 |
| hypothetical protein | SAMN05421827_107144 | Not Available | + | 2544811 - 2545422 | 22562.4 |
| regulatory protein, tetr family | SAMN05421827_107145 | Not Available | - | 2545542 - 2546171 | 23858.5 |
| hypothetical protein | SAMN05421827_107146 | Not Available | + | 2546325 - 2546582 | 9127.83 |
| protein of unknown function | SAMN05421827_107147 | Not Available | + | 2546589 - 2547335 | 28448.5 |
| hypothetical protein | SAMN05421827_107148 | Not Available | + | 2547419 - 2547793 | 14466.7 |
| hypothetical protein | SAMN05421827_107149 | Not Available | + | 2548026 - 2548463 | 16893.3 |
| iron complex outermembrane recepter protein | SAMN05421827_107150 | Not Available | + | 2548496 - 2550658 | 80294.4 |
| uncharacterized iron-regulated membrane protein | SAMN05421827_107151 | Not Available | + | 2550663 - 2551778 | 42708.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.