Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter terrae
Accession NumberFNCH00000000.1
Gene Summary
Adenine Count
1757318 bp
Thymine Count
1765928 bp
Guanine Count
1120783 bp
Cytosine Count
1109922 bp
Genome Length
5755101 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421827_107122 | Not Available | - | 2525447 - 2526100 | 25090.7 |
| uncharacterized conserved protein yndb, ahsa1/start domain | SAMN05421827_107123 | Not Available | - | 2526552 - 2526965 | 15876.9 |
| dna-binding transcriptional regulator, hxlr family | SAMN05421827_107124 | Not Available | + | 2527090 - 2527440 | 13521.5 |
| enamine deaminase rida, house cleaning of reactive enamine intermediates, yjgf/yer057c/uk114 family | SAMN05421827_107125 | Not Available | - | 2527572 - 2528036 | 17443.8 |
| camp-binding domain of crp or a regulatory subunit of camp-dependent protein kinases | SAMN05421827_107126 | Not Available | - | 2528039 - 2528608 | 22503.2 |
| camp-binding domain of crp or a regulatory subunit of camp-dependent protein kinases | SAMN05421827_107127 | Not Available | + | 2528856 - 2529416 | 21645.4 |
| uncharacterized conserved protein ybjt, contains nad(p)-binding and duf2867 domains | SAMN05421827_107128 | Not Available | + | 2529491 - 2530417 | 34223.4 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN05421827_107129 | Not Available | + | 2530401 - 2531330 | 35092.7 |
| hypothetical protein | SAMN05421827_107130 | Not Available | - | 2531626 - 2531943 | 11799.7 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN05421827_107131 | Not Available | - | 2531965 - 2532759 | 27990.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.