Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter terrae
Accession NumberFNCH00000000.1
Gene Summary
Adenine Count
1757318 bp
Thymine Count
1765928 bp
Guanine Count
1120783 bp
Cytosine Count
1109922 bp
Genome Length
5755101 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dj-1/pfpi family protein | SAMN05421827_107102 | Not Available | + | 2504963 - 2505706 | 27352.6 |
| dknyy family protein | SAMN05421827_107103 | Not Available | + | 2505996 - 2506715 | 27527.6 |
| acetyltransferase (gnat) domain-containing protein | SAMN05421827_107104 | Not Available | - | 2506867 - 2507373 | 18934.9 |
| beta-lactamase | SAMN05421827_107105 | Not Available | + | 2507574 - 2508032 | 16816.6 |
| beta-lactamase | SAMN05421827_107106 | Not Available | + | 2508051 - 2508746 | 26498.0 |
| hypothetical protein | SAMN05421827_107107 | Not Available | + | 2509063 - 2509686 | 24287.1 |
| hypothetical protein | SAMN05421827_107108 | Not Available | + | 2510019 - 2510312 | 10802.8 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05421827_107109 | Not Available | + | 2510533 - 2511114 | 23124.9 |
| fecr protein | SAMN05421827_107110 | Not Available | + | 2511170 - 2512351 | 43816.3 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05421827_107111 | Not Available | + | 2512614 - 2516117 | 129773.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.