Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter terrae
Accession NumberFNCH00000000.1
Gene Summary
Adenine Count
1757318 bp
Thymine Count
1765928 bp
Guanine Count
1120783 bp
Cytosine Count
1109922 bp
Genome Length
5755101 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| molecular chaperone hscb | SAMN05421827_10792 | Not Available | + | 2487975 - 2488508 | 20592.2 |
| integral membrane protein | SAMN05421827_10793 | Not Available | + | 2489127 - 2489420 | 11184.2 |
| Trna-leu | Not Available | Not Available | + | 2489509 - 2489591 | Not Available |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05421827_10795 | Not Available | + | 2490398 - 2490994 | 23358.7 |
| protein of unknown function | SAMN05421827_10796 | Not Available | + | 2491093 - 2492241 | 41900.6 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05421827_10797 | Not Available | + | 2492508 - 2496224 | 136829.0 |
| susd family protein | SAMN05421827_10798 | Not Available | + | 2496229 - 2497674 | 53803.0 |
| peroxiredoxin | SAMN05421827_10799 | Not Available | + | 2497704 - 2498846 | 41895.6 |
| predicted zn-dependent peptidase | SAMN05421827_107100 | Not Available | + | 2498860 - 2501802 | 110954.0 |
| predicted zn-dependent peptidase | SAMN05421827_107101 | Not Available | + | 2501815 - 2504754 | 110636.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.