Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter terrae
Accession NumberFNCH00000000.1
Gene Summary
Adenine Count
1757318 bp
Thymine Count
1765928 bp
Guanine Count
1120783 bp
Cytosine Count
1109922 bp
Genome Length
5755101 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421827_10782 | Not Available | + | 2478456 - 2479124 | 25698.8 |
| protein of unknown function | SAMN05421827_10783 | Not Available | + | 2479138 - 2479707 | 20677.1 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN05421827_10784 | Not Available | + | 2479835 - 2480785 | 36151.0 |
| glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-n-acetylglucosamine synthase | SAMN05421827_10785 | Not Available | + | 2480867 - 2481829 | 37033.8 |
| hypothetical protein | SAMN05421827_10786 | Not Available | + | 2481832 - 2482620 | 29612.3 |
| hypothetical protein | SAMN05421827_10787 | Not Available | + | 2482631 - 2482858 | 8837.41 |
| zeta toxin | SAMN05421827_10788 | Not Available | + | 2482861 - 2483463 | 23303.8 |
| phenylacetate-coenzyme a ligase paak, adenylate-forming domain family | SAMN05421827_10789 | Not Available | + | 2483470 - 2484969 | 56303.3 |
| 1-deoxy-d-xylulose-5-phosphate reductoisomerase | SAMN05421827_10790 | Not Available | + | 2485313 - 2486473 | 42408.7 |
| regulator of sigma e protease | SAMN05421827_10791 | Not Available | + | 2486503 - 2487891 | 51255.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.