Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter terrae
Accession NumberFNCH00000000.1
Gene Summary
Adenine Count
1757318 bp
Thymine Count
1765928 bp
Guanine Count
1120783 bp
Cytosine Count
1109922 bp
Genome Length
5755101 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| nucleoside 2-deoxyribosyltransferase like | SAMN05421827_10772 | Not Available | + | 2468858 - 2469343 | 18525.2 |
| conserved hypothetical protein, riba/ribd-fused | SAMN05421827_10773 | Not Available | + | 2469356 - 2470834 | 55708.0 |
| hypothetical protein | SAMN05421827_10774 | Not Available | + | 2470815 - 2471000 | 7063.72 |
| o-acetyl-adp-ribose deacetylase (regulator of rnase iii), contains macro domain | SAMN05421827_10775 | Not Available | + | 2470981 - 2471493 | 18291.0 |
| putative rna 2'-phosphotransferase | SAMN05421827_10776 | Not Available | + | 2471507 - 2472049 | 20436.5 |
| serine/threonine protein phosphatase 1 | SAMN05421827_10777 | Not Available | + | 2472051 - 2472782 | 28182.2 |
| nicotinamide phosphoribosyltransferase | SAMN05421827_10778 | Not Available | + | 2472803 - 2474260 | 54869.4 |
| hypothetical protein | SAMN05421827_10779 | Not Available | + | 2474398 - 2474802 | 15152.2 |
| n-terminal double-transmembrane domain-containing protein | SAMN05421827_10780 | Not Available | + | 2475045 - 2477084 | 75563.8 |
| dihydroorotase | SAMN05421827_10781 | Not Available | + | 2477081 - 2478337 | 45484.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.