Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter terrae
Accession NumberFNCH00000000.1
Gene Summary
Adenine Count
1757318 bp
Thymine Count
1765928 bp
Guanine Count
1120783 bp
Cytosine Count
1109922 bp
Genome Length
5755101 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| cyclase/type i restriction enzyme m protein | SAMN05421827_10762 | Not Available | - | 2459007 - 2459186 | 6961.34 |
| phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase | SAMN05421827_10763 | Not Available | - | 2459283 - 2460032 | 28051.0 |
| glutamine amidotransferase | SAMN05421827_10764 | Not Available | - | 2460034 - 2460627 | 21618.1 |
| imidazoleglycerol-phosphate dehydratase / histidinol-phosphatase | SAMN05421827_10765 | Not Available | - | 2460813 - 2461946 | 42703.9 |
| histidinol-phosphate aminotransferase | SAMN05421827_10766 | Not Available | - | 2461948 - 2462988 | 38782.4 |
| histidinol dehydrogenase | SAMN05421827_10767 | Not Available | - | 2463131 - 2464444 | 47240.6 |
| atp phosphoribosyltransferase | SAMN05421827_10768 | Not Available | - | 2464494 - 2465345 | 30797.6 |
| l,d-transpeptidase catalytic domain | SAMN05421827_10769 | Not Available | + | 2465621 - 2467183 | 59814.2 |
| 8-oxo-dgtp diphosphatase | SAMN05421827_10770 | Not Available | + | 2467257 - 2467949 | 26544.1 |
| ribose-phosphate pyrophosphokinase | SAMN05421827_10771 | Not Available | + | 2468018 - 2468851 | 30291.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.