Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter terrae
Accession NumberFNCH00000000.1
Gene Summary
Adenine Count
1757318 bp
Thymine Count
1765928 bp
Guanine Count
1120783 bp
Cytosine Count
1109922 bp
Genome Length
5755101 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| molecular chaperone grpe | SAMN05421827_10752 | Not Available | - | 2451416 - 2451997 | 21763.6 |
| cell division transport system atp-binding protein | SAMN05421827_10753 | Not Available | - | 2452124 - 2452807 | 25368.8 |
| hypothetical protein | SAMN05421827_10754 | Not Available | - | 2452809 - 2453012 | 7835.76 |
| acyl-coa reductase (luxc) | SAMN05421827_10755 | Not Available | - | 2453081 - 2454097 | 38067.2 |
| 4fe-4s dicluster domain-containing protein | SAMN05421827_10756 | Not Available | + | 2454176 - 2454526 | 12770.6 |
| nucleotide-binding universal stress protein, uspa family | SAMN05421827_10757 | Not Available | - | 2454892 - 2455407 | 18783.6 |
| sh3 domain-containing protein | SAMN05421827_10758 | Not Available | + | 2455454 - 2456239 | 29668.2 |
| wd domain-containing protein, g-beta repeat-containing protein | SAMN05421827_10759 | Not Available | - | 2456413 - 2457309 | 34050.7 |
| phosphoribosyl-atp pyrophosphohydrolase / phosphoribosyl-amp cyclohydrolase | SAMN05421827_10760 | Not Available | - | 2457385 - 2458008 | 23328.9 |
| cyclase | SAMN05421827_10761 | Not Available | - | 2458049 - 2458912 | 31312.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.