Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter terrae
Accession NumberFNCH00000000.1
Gene Summary
Adenine Count
1757318 bp
Thymine Count
1765928 bp
Guanine Count
1120783 bp
Cytosine Count
1109922 bp
Genome Length
5755101 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| fes assembly protein iscx | SAMN05421827_10742 | Not Available | + | 2442105 - 2442347 | 9780.25 |
| 3-deoxy-d-manno-octulosonate 8-phosphate phosphatase (kdo 8-p phosphatase) | SAMN05421827_10743 | Not Available | + | 2442427 - 2442954 | 19075.1 |
| nucleotide-binding universal stress protein, uspa family | SAMN05421827_10744 | Not Available | + | 2443735 - 2444565 | 31035.9 |
| hypothetical protein | SAMN05421827_10745 | Not Available | + | 2444669 - 2445058 | 14691.0 |
| septum formation protein | SAMN05421827_10746 | Not Available | + | 2445127 - 2445693 | 21039.2 |
| hypothetical protein | SAMN05421827_10747 | Not Available | + | 2445746 - 2446423 | 25534.4 |
| exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase | SAMN05421827_10748 | Not Available | - | 2446586 - 2447500 | 34014.5 |
| uncharacterized conserved protein yece, duf72 family | SAMN05421827_10749 | Not Available | - | 2447944 - 2448660 | 28842.3 |
| protein of unknown function | SAMN05421827_10750 | Not Available | + | 2449154 - 2450104 | 35967.7 |
| molecular chaperone dnaj | SAMN05421827_10751 | Not Available | - | 2450163 - 2451326 | 41626.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.