Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter terrae
Accession NumberFNCH00000000.1
Gene Summary
Adenine Count
1757318 bp
Thymine Count
1765928 bp
Guanine Count
1120783 bp
Cytosine Count
1109922 bp
Genome Length
5755101 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| heme exporter protein c | SAMN05421827_10732 | Not Available | + | 2430435 - 2431097 | 25284.3 |
| hypothetical protein | SAMN05421827_10733 | Not Available | + | 2431099 - 2431317 | 8183.53 |
| glutamate dehydrogenase (nad(p)+) | SAMN05421827_10734 | Not Available | + | 2431737 - 2433158 | 51854.2 |
| hypothetical protein | SAMN05421827_10735 | Not Available | - | 2433431 - 2434828 | 52924.9 |
| hypothetical protein | SAMN05421827_10736 | Not Available | - | 2434960 - 2436972 | 75607.5 |
| hypothetical protein | SAMN05421827_10737 | Not Available | - | 2437029 - 2437709 | 25100.2 |
| cytochrome c-type biogenesis protein ccme | SAMN05421827_10738 | Not Available | + | 2437963 - 2438397 | 16371.6 |
| cytochrome c-type biogenesis protein ccmf | SAMN05421827_10739 | Not Available | + | 2438403 - 2440868 | 92698.7 |
| predicted oxidoreductase, contains short-chain dehydrogenase (sdr) and duf2520 domains | SAMN05421827_10740 | Not Available | + | 2440872 - 2441636 | 27802.6 |
| ferredoxin, 2fe-2s | SAMN05421827_10741 | Not Available | + | 2441677 - 2442009 | 12044.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.