Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter terrae
Accession NumberFNCH00000000.1
Gene Summary
Adenine Count
1757318 bp
Thymine Count
1765928 bp
Guanine Count
1120783 bp
Cytosine Count
1109922 bp
Genome Length
5755101 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glycerophosphoryl diester phosphodiesterase | SAMN05421827_1072 | Not Available | + | 2401669 - 2402589 | 34662.8 |
| abc-2 type transport system atp-binding protein | SAMN05421827_1073 | Not Available | + | 2402674 - 2403381 | 26010.0 |
| hypothetical protein | SAMN05421827_1074 | Not Available | + | 2403386 - 2403928 | 19547.8 |
| abc-2 type transport system permease protein | SAMN05421827_1075 | Not Available | + | 2404002 - 2404727 | 26882.3 |
| abc-2 type transport system permease protein | SAMN05421827_1076 | Not Available | + | 2404727 - 2406412 | 63218.9 |
| dna polymerase-3 subunit beta | SAMN05421827_1077 | Not Available | + | 2406446 - 2407570 | 41318.4 |
| protein of unknown function | SAMN05421827_1078 | Not Available | + | 2407664 - 2408341 | 24742.3 |
| hypothetical protein | SAMN05421827_1079 | Not Available | + | 2408400 - 2409131 | 26603.9 |
| membrane-associated protein | SAMN05421827_10710 | Not Available | + | 2409197 - 2409883 | 25567.1 |
| hypothetical protein | SAMN05421827_10711 | Not Available | - | 2409884 - 2410840 | 37022.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.