Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter terrae
Accession NumberFNCH00000000.1
Gene Summary
Adenine Count
1757318 bp
Thymine Count
1765928 bp
Guanine Count
1120783 bp
Cytosine Count
1109922 bp
Genome Length
5755101 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dna-binding transcriptional response regulator, ntrc family, contains rec, aaa-type atpase, and a fis-type dna-binding domains | SAMN05421827_106239 | Not Available | + | 2384819 - 2386147 | 49092.6 |
| hypothetical protein | SAMN05421827_106240 | Not Available | - | 2386448 - 2386900 | 17027.5 |
| peptide/nickel transport system substrate-binding protein | SAMN05421827_106241 | Not Available | + | 2386947 - 2388581 | 62363.0 |
| outer membrane receptor for ferrienterochelin and colicins | SAMN05421827_106242 | Not Available | - | 2388913 - 2391357 | 88556.3 |
| stearoyl-coa desaturase (delta-9 desaturase) | SAMN05421827_106243 | Not Available | - | 2391917 - 2392549 | 25221.6 |
| mannose-6-phosphate isomerase, cupin superfamily | SAMN05421827_106244 | Not Available | - | 2392785 - 2393282 | 18886.1 |
| starch-binding associating with outer membrane | SAMN05421827_106245 | Not Available | - | 2393591 - 2395147 | 57362.9 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05421827_106246 | Not Available | - | 2395173 - 2398373 | 116681.0 |
| hypothetical protein | SAMN05421827_106247 | Not Available | - | 2398682 - 2398849 | 6780.68 |
| glycyl-trna synthetase | SAMN05421827_1071 | Not Available | - | 2399547 - 2401190 | 63488.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.