Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter terrae
Accession NumberFNCH00000000.1
Gene Summary
Adenine Count
1757318 bp
Thymine Count
1765928 bp
Guanine Count
1120783 bp
Cytosine Count
1109922 bp
Genome Length
5755101 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421827_106229 | Not Available | + | 2371527 - 2372738 | 46622.2 |
| 3-hydroxyisobutyrate dehydrogenase | SAMN05421827_106230 | Not Available | - | 2372830 - 2373684 | 30211.9 |
| 3-methyladenine dna glycosylase alkc | SAMN05421827_106231 | Not Available | + | 2373830 - 2374960 | 43095.5 |
| predicted ntp pyrophosphohydrolase, nudix family | SAMN05421827_106232 | Not Available | - | 2374949 - 2375407 | 17267.7 |
| hypothetical protein | SAMN05421827_106233 | Not Available | - | 2375602 - 2375793 | 7061.42 |
| putative alpha-1,2-mannosidase | SAMN05421827_106234 | Not Available | - | 2375864 - 2377948 | 78422.2 |
| protein of unknown function | SAMN05421827_106235 | Not Available | - | 2378582 - 2379100 | 18864.8 |
| methyltransferase domain-containing protein | SAMN05421827_106236 | Not Available | - | 2379243 - 2379866 | 23737.1 |
| transporter, sss family | SAMN05421827_106237 | Not Available | - | 2379957 - 2381651 | 62814.3 |
| n-acetylglucosaminyl deacetylase, lmbe family | SAMN05421827_106238 | Not Available | - | 2381752 - 2384220 | 91552.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.