Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter terrae
Accession NumberFNCH00000000.1
Gene Summary
Adenine Count
1757318 bp
Thymine Count
1765928 bp
Guanine Count
1120783 bp
Cytosine Count
1109922 bp
Genome Length
5755101 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| putative abc transport system atp-binding protein | SAMN05421827_106219 | Not Available | + | 2356583 - 2357317 | 26638.0 |
| putative abc transport system permease protein | SAMN05421827_106220 | Not Available | + | 2357307 - 2359841 | 93439.5 |
| 3-hexulose-6-phosphate synthase | SAMN05421827_106221 | Not Available | - | 2360057 - 2360689 | 21225.7 |
| 6-phospho-3-hexuloisomerase | SAMN05421827_106222 | Not Available | - | 2360723 - 2361352 | 22796.4 |
| arac-type dna-binding protein | SAMN05421827_106223 | Not Available | + | 2361555 - 2362418 | 33780.7 |
| hypothetical protein | SAMN05421827_106224 | Not Available | + | 2362461 - 2362643 | 6822.22 |
| gnt-i system high-affinity gluconate transporter/gnt-ii system l-idonate transporter | SAMN05421827_106225 | Not Available | + | 2362764 - 2363984 | 42620.0 |
| outer membrane receptor proteins, mostly fe transport | SAMN05421827_106226 | Not Available | - | 2366056 - 2368503 | 91467.8 |
| blar1 peptidase m56 | SAMN05421827_106227 | Not Available | - | 2368540 - 2370510 | 73179.9 |
| predicted transcriptional regulator | SAMN05421827_106228 | Not Available | - | 2370543 - 2370932 | 15048.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.