Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter terrae
Accession NumberFNCH00000000.1
Gene Summary
Adenine Count
1757318 bp
Thymine Count
1765928 bp
Guanine Count
1120783 bp
Cytosine Count
1109922 bp
Genome Length
5755101 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| fucose permease | SAMN05421827_106179 | Not Available | - | 2311037 - 2312308 | 45566.2 |
| hypothetical protein | SAMN05421827_106180 | Not Available | + | 2312712 - 2313461 | 27972.5 |
| hypothetical protein | SAMN05421827_106181 | Not Available | - | 2313533 - 2313826 | 11576.4 |
| prc-barrel domain-containing protein | SAMN05421827_106182 | Not Available | + | 2314103 - 2314612 | 19338.8 |
| hypothetical protein | SAMN05421827_106183 | Not Available | + | 2314938 - 2315537 | 21308.8 |
| mechanosensitive ion channel | SAMN05421827_106184 | Not Available | + | 2315820 - 2318180 | 89218.6 |
| hypothetical protein | SAMN05421827_106185 | Not Available | + | 2318192 - 2319007 | 31031.7 |
| putative acetyltransferase | SAMN05421827_106186 | Not Available | + | 2319255 - 2319698 | 17068.7 |
| hypothetical protein | SAMN05421827_106187 | Not Available | + | 2319737 - 2320732 | 36872.5 |
| beta-xylosidase | SAMN05421827_106188 | Not Available | - | 2320972 - 2322489 | 57153.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.