Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter terrae
Accession NumberFNCH00000000.1
Gene Summary
Adenine Count
1757318 bp
Thymine Count
1765928 bp
Guanine Count
1120783 bp
Cytosine Count
1109922 bp
Genome Length
5755101 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421827_106169 | Not Available | + | 2300920 - 2302149 | 47008.7 |
| glycosyltransferase family 4 | SAMN05421827_106170 | Not Available | + | 2302139 - 2303443 | 49913.6 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN05421827_106171 | Not Available | + | 2303443 - 2304711 | 47932.9 |
| hypothetical protein | SAMN05421827_106172 | Not Available | + | 2304701 - 2306113 | 54021.5 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN05421827_106173 | Not Available | + | 2306145 - 2307401 | 46876.1 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN05421827_106174 | Not Available | + | 2307403 - 2308263 | 34342.6 |
| exosortase/archaeosortase family protein | SAMN05421827_106175 | Not Available | + | 2308277 - 2308858 | 22170.0 |
| putative colanic acid biosynthesis acetyltransferase wcaf | SAMN05421827_106176 | Not Available | + | 2308998 - 2309435 | 15972.7 |
| hypothetical protein | SAMN05421827_106177 | Not Available | + | 2309631 - 2310026 | 15642.9 |
| dipeptidase e | SAMN05421827_106178 | Not Available | + | 2310139 - 2310912 | 28481.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.