Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter terrae
Accession NumberFNCH00000000.1
Gene Summary
Adenine Count
1757318 bp
Thymine Count
1765928 bp
Guanine Count
1120783 bp
Cytosine Count
1109922 bp
Genome Length
5755101 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| peptidoglycan/lps o-acetylase oafa/yrhl, contains acyltransferase and sgnh-hydrolase domains | SAMN05421827_106159 | Not Available | + | 2291710 - 2292768 | 41387.6 |
| glycosyltransferase like family protein | SAMN05421827_106160 | Not Available | + | 2292770 - 2293645 | 34120.2 |
| glycosyltransferase family 10 (fucosyltransferase) c-term | SAMN05421827_106161 | Not Available | + | 2293642 - 2294658 | 39934.9 |
| peptidoglycan/lps o-acetylase oafa/yrhl, contains acyltransferase and sgnh-hydrolase domains | SAMN05421827_106162 | Not Available | + | 2294661 - 2295635 | 37643.4 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN05421827_106163 | Not Available | + | 2295635 - 2296618 | 37272.4 |
| hypothetical protein | SAMN05421827_106164 | Not Available | + | 2296615 - 2297316 | 26383.0 |
| glycosyl transferase family 11 | SAMN05421827_106165 | Not Available | + | 2297317 - 2298210 | 34863.0 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN05421827_106166 | Not Available | + | 2298194 - 2299195 | 39064.5 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN05421827_106167 | Not Available | + | 2299192 - 2300205 | 37992.4 |
| methyltransferase, fkbm family | SAMN05421827_106168 | Not Available | + | 2300207 - 2300929 | 27375.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.