Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter terrae
Accession NumberFNCH00000000.1
Gene Summary
Adenine Count
1757318 bp
Thymine Count
1765928 bp
Guanine Count
1120783 bp
Cytosine Count
1109922 bp
Genome Length
5755101 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| lipopolysaccharide transport system permease protein | SAMN05421827_106149 | Not Available | + | 2282879 - 2283736 | 32610.7 |
| four helix bundle protein | SAMN05421827_106150 | Not Available | + | 2283856 - 2284215 | 13569.2 |
| lipopolysaccharide transport system atp-binding protein | SAMN05421827_106151 | Not Available | + | 2284272 - 2285528 | 46354.6 |
| glycosyl transferase family 2 | SAMN05421827_106152 | Not Available | + | 2285537 - 2286583 | 40415.0 |
| hypothetical protein | SAMN05421827_106153 | Not Available | + | 2286573 - 2287010 | 16557.9 |
| methyltransferase domain-containing protein | SAMN05421827_106154 | Not Available | + | 2287007 - 2287759 | 28891.3 |
| perosamine synthetase | SAMN05421827_106155 | Not Available | + | 2287759 - 2288865 | 41087.9 |
| glycosyl transferases group 1 | SAMN05421827_106156 | Not Available | + | 2288853 - 2290064 | 46921.2 |
| glycosyltransferase, gt2 family | SAMN05421827_106157 | Not Available | + | 2290052 - 2290942 | 33912.7 |
| hypothetical protein | SAMN05421827_106158 | Not Available | + | 2290944 - 2291678 | 29058.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.