Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter terrae
Accession NumberFNCH00000000.1
Gene Summary
Adenine Count
1757318 bp
Thymine Count
1765928 bp
Guanine Count
1120783 bp
Cytosine Count
1109922 bp
Genome Length
5755101 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase | SAMN05421827_106139 | Not Available | - | 2271641 - 2272381 | 27825.6 |
| hypothetical protein | SAMN05421827_106140 | Not Available | - | 2272494 - 2272889 | 14040.0 |
| hypothetical protein | SAMN05421827_106141 | Not Available | - | 2273255 - 2273518 | 10142.7 |
| hypothetical protein | SAMN05421827_106142 | Not Available | - | 2273953 - 2274519 | 20099.4 |
| hypothetical protein | SAMN05421827_106143 | Not Available | + | 2274965 - 2275450 | 17752.1 |
| polysaccharide export outer membrane protein | SAMN05421827_106144 | Not Available | + | 2275861 - 2276676 | 29650.2 |
| capsular exopolysaccharide family | SAMN05421827_106145 | Not Available | + | 2276676 - 2279084 | 90393.2 |
| transcription antitermination factor nusg | SAMN05421827_106146 | Not Available | + | 2279158 - 2279661 | 19285.6 |
| asparagine synthase (glutamine-hydrolysing) | SAMN05421827_106147 | Not Available | + | 2279846 - 2281633 | 68723.3 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN05421827_106148 | Not Available | + | 2281623 - 2282774 | 43973.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.