Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter terrae
Accession NumberFNCH00000000.1
Gene Summary
Adenine Count
1757318 bp
Thymine Count
1765928 bp
Guanine Count
1120783 bp
Cytosine Count
1109922 bp
Genome Length
5755101 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| cell division protein ftsi (penicillin-binding protein 3) | SAMN05421827_106129 | Not Available | - | 2260859 - 2262961 | 77148.5 |
| hypothetical protein | SAMN05421827_106130 | Not Available | - | 2262951 - 2263373 | 16140.6 |
| 16s rrna (cytosine1402-n4)-methyltransferase | SAMN05421827_106131 | Not Available | - | 2263370 - 2264275 | 33835.5 |
| mraz protein | SAMN05421827_106132 | Not Available | - | 2264265 - 2264732 | 17109.6 |
| uncharacterized iron-regulated membrane protein | SAMN05421827_106133 | Not Available | + | 2265243 - 2266814 | 58485.9 |
| phosphoglycerate kinase | SAMN05421827_106134 | Not Available | - | 2266913 - 2268106 | 42689.3 |
| acetyltransferase (gnat) domain-containing protein | SAMN05421827_106135 | Not Available | - | 2268113 - 2268550 | 16472.7 |
| uncharacterized membrane protein | SAMN05421827_106136 | Not Available | + | 2268794 - 2269210 | 15157.7 |
| glyceraldehyde 3-phosphate dehydrogenase | SAMN05421827_106137 | Not Available | - | 2269212 - 2270207 | 35778.9 |
| udp-n-acetylmuramyl pentapeptide phosphotransferase/udp-n-acetylglucosamine-1-phosphate transferase | SAMN05421827_106138 | Not Available | - | 2270353 - 2271543 | 43600.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.