Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter terrae
Accession NumberFNCH00000000.1
Gene Summary
Adenine Count
1757318 bp
Thymine Count
1765928 bp
Guanine Count
1120783 bp
Cytosine Count
1109922 bp
Genome Length
5755101 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| iron complex outermembrane recepter protein | SAMN05421827_10697 | Not Available | - | 2228320 - 2228709 | 13432.1 |
| penicillin amidase | SAMN05421827_10698 | Not Available | + | 2228906 - 2231335 | 92185.0 |
| hypothetical protein | SAMN05421827_10699 | Not Available | + | 2231342 - 2231701 | 13138.9 |
| acyl-protein synthetase, luxe | SAMN05421827_106100 | Not Available | + | 2231706 - 2232704 | 37532.9 |
| fur family transcriptional regulator, ferric uptake regulator | SAMN05421827_106103 | Not Available | - | 2233031 - 2233468 | 16150.3 |
| hypothetical protein | SAMN05421827_106104 | Not Available | - | 2233489 - 2233938 | 17201.2 |
| hypothetical protein | SAMN05421827_106105 | Not Available | - | 2233935 - 2234369 | 16108.0 |
| hypothetical protein | SAMN05421827_106106 | Not Available | - | 2234382 - 2234819 | 16170.3 |
| putative abc transport system permease protein | SAMN05421827_106107 | Not Available | - | 2234823 - 2236037 | 44253.6 |
| putative abc transport system atp-binding protein | SAMN05421827_106108 | Not Available | - | 2236037 - 2236663 | 22959.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.