Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter terrae
Accession NumberFNCH00000000.1
Gene Summary
Adenine Count
1757318 bp
Thymine Count
1765928 bp
Guanine Count
1120783 bp
Cytosine Count
1109922 bp
Genome Length
5755101 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 6-phosphofructokinase 1 | SAMN05421827_10687 | Not Available | + | 2213934 - 2214920 | 35102.4 |
| hypothetical protein | SAMN05421827_10688 | Not Available | + | 2214922 - 2215764 | 31747.6 |
| glyceraldehyde 3-phosphate dehydrogenase | SAMN05421827_10689 | Not Available | + | 2215771 - 2216769 | 35566.5 |
| hypothetical protein | SAMN05421827_10690 | Not Available | + | 2217124 - 2217252 | 5140.58 |
| histidine kinase-, dna gyrase b-, and hsp90-like atpase | SAMN05421827_10691 | Not Available | + | 2217603 - 2218823 | 45626.8 |
| camp-binding domain of crp or a regulatory subunit of camp-dependent protein kinases | SAMN05421827_10692 | Not Available | - | 2219301 - 2219909 | 23191.4 |
| sigma-70 region 2 | SAMN05421827_10693 | Not Available | - | 2220005 - 2220325 | 12349.6 |
| 1,4-alpha-glucan branching enzyme | SAMN05421827_10694 | Not Available | - | 2220957 - 2222921 | 75460.3 |
| alpha-glucosidase | SAMN05421827_10695 | Not Available | - | 2222984 - 2225446 | 96312.8 |
| outer membrane receptor proteins, mostly fe transport | SAMN05421827_10696 | Not Available | - | 2225836 - 2228316 | 90928.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.