Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter terrae
Accession NumberFNCH00000000.1
Gene Summary
Adenine Count
1757318 bp
Thymine Count
1765928 bp
Guanine Count
1120783 bp
Cytosine Count
1109922 bp
Genome Length
5755101 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| outer membrane protein beta-barrel domain-containing protein | SAMN05421827_10677 | Not Available | - | 2202920 - 2203510 | 21134.5 |
| hypothetical protein | SAMN05421827_10678 | Not Available | - | 2203521 - 2203817 | 11089.1 |
| flp pilus assembly protein tadd, contains tpr repeats | SAMN05421827_10679 | Not Available | + | 2203949 - 2205103 | 43651.2 |
| protein of unknown function | SAMN05421827_10680 | Not Available | - | 2205100 - 2205561 | 17790.2 |
| alpha-l-rhamnosidase | SAMN05421827_10681 | Not Available | - | 2205716 - 2208364 | 98911.4 |
| riboflavin synthase | SAMN05421827_10682 | Not Available | - | 2208505 - 2209089 | 21329.2 |
| acetyl-coa carboxylase, biotin carboxylase subunit | SAMN05421827_10683 | Not Available | - | 2209284 - 2210807 | 55954.5 |
| l-threonine aldolase | SAMN05421827_10684 | Not Available | - | 2210859 - 2211884 | 36990.8 |
| badf-type atpase | SAMN05421827_10685 | Not Available | + | 2212104 - 2212964 | 32119.0 |
| 8-oxo-dgtp diphosphatase | SAMN05421827_10686 | Not Available | - | 2213133 - 2213822 | 26742.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.