Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter terrae
Accession NumberFNCH00000000.1
Gene Summary
Adenine Count
1757318 bp
Thymine Count
1765928 bp
Guanine Count
1120783 bp
Cytosine Count
1109922 bp
Genome Length
5755101 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase involved in cell wall bisynthesis | SAMN05421827_10667 | Not Available | - | 2192624 - 2193847 | 46389.7 |
| glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-n-acetylglucosamine synthase | SAMN05421827_10668 | Not Available | - | 2193939 - 2195138 | 44728.1 |
| o-antigen ligase | SAMN05421827_10669 | Not Available | - | 2195122 - 2196579 | 53577.1 |
| uncharacterized protein involved in exopolysaccharide biosynthesis | SAMN05421827_10670 | Not Available | - | 2196589 - 2198742 | 80804.3 |
| outer membrane efflux protein | SAMN05421827_10671 | Not Available | - | 2198749 - 2199438 | 26373.7 |
| protein n-acetyltransferase, rimj/riml family | SAMN05421827_10672 | Not Available | + | 2199658 - 2200197 | 20572.7 |
| heat shock protein hslj | SAMN05421827_10673 | Not Available | + | 2200257 - 2200655 | 14558.6 |
| membrane protein | SAMN05421827_10674 | Not Available | + | 2200730 - 2201656 | 34633.0 |
| dna-binding transcriptional regulator, marr family | SAMN05421827_10675 | Not Available | - | 2201663 - 2202097 | 16287.2 |
| peroxiredoxin, ohr subfamily | SAMN05421827_10676 | Not Available | - | 2202312 - 2202731 | 14958.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.