Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter terrae
Accession NumberFNCH00000000.1
Gene Summary
Adenine Count
1757318 bp
Thymine Count
1765928 bp
Guanine Count
1120783 bp
Cytosine Count
1109922 bp
Genome Length
5755101 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| alkylated dna repair dioxygenase alkb | SAMN05421827_10657 | Not Available | + | 2177443 - 2178051 | 23499.1 |
| hypothetical protein | SAMN05421827_10658 | Not Available | - | 2178404 - 2179195 | 29401.1 |
| pas domain s-box-containing protein | SAMN05421827_10659 | Not Available | - | 2179657 - 2183985 | 161943.0 |
| sugar transferase involved in lps biosynthesis (colanic, teichoic acid) | SAMN05421827_10660 | Not Available | - | 2184210 - 2185412 | 45745.6 |
| response regulator receiver domain-containing protein | SAMN05421827_10661 | Not Available | - | 2185412 - 2185816 | 15007.2 |
| pas domain s-box-containing protein | SAMN05421827_10662 | Not Available | + | 2186233 - 2188518 | 84983.0 |
| glycosyltransferase sugar-binding region containing dxd motif-containing protein | SAMN05421827_10663 | Not Available | - | 2188529 - 2189263 | 28252.7 |
| membrane protein involved in the export of o-antigen and teichoic acid | SAMN05421827_10664 | Not Available | - | 2189260 - 2190786 | 57300.1 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN05421827_10665 | Not Available | + | 2190899 - 2191648 | 28125.0 |
| hypothetical protein | SAMN05421827_10666 | Not Available | - | 2191653 - 2192567 | 34777.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.