Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter terrae
Accession NumberFNCH00000000.1
Gene Summary
Adenine Count
1757318 bp
Thymine Count
1765928 bp
Guanine Count
1120783 bp
Cytosine Count
1109922 bp
Genome Length
5755101 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ankyrin repeat | SAMN05421827_10647 | Not Available | + | 2168265 - 2169611 | 49194.3 |
| hypothetical protein | SAMN05421827_10648 | Not Available | + | 2169878 - 2170450 | 21949.6 |
| glucose/arabinose dehydrogenase, beta-propeller fold | SAMN05421827_10649 | Not Available | + | 2170836 - 2172155 | 47213.8 |
| iron complex outermembrane recepter protein | SAMN05421827_10650 | Not Available | + | 2172236 - 2174287 | 76975.9 |
| single-strand dna-binding protein | SAMN05421827_10651 | Not Available | - | 2174343 - 2174690 | 12697.1 |
| hypothetical protein | SAMN05421827_10652 | Not Available | + | 2174926 - 2175285 | 13773.5 |
| hypothetical protein | SAMN05421827_10653 | Not Available | + | 2175386 - 2175724 | 12647.0 |
| mepb protein | SAMN05421827_10654 | Not Available | + | 2175753 - 2176076 | 12191.5 |
| arac family transcriptional regulator, regulatory protein of adaptative response / methylated-dna-[protein]-cysteine methyltransferase | SAMN05421827_10655 | Not Available | + | 2176374 - 2177222 | 31550.0 |
| metal binding domain of ada | SAMN05421827_10656 | Not Available | + | 2177219 - 2177467 | 9651.99 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.