Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter terrae
Accession NumberFNCH00000000.1
Gene Summary
Adenine Count
1757318 bp
Thymine Count
1765928 bp
Guanine Count
1120783 bp
Cytosine Count
1109922 bp
Genome Length
5755101 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| small subunit ribosomal protein s6 | SAMN05421827_10632 | Not Available | - | 2157450 - 2157806 | 13431.2 |
| hypothetical protein | SAMN05421827_10633 | Not Available | + | 2157907 - 2158038 | 5288.46 |
| hypothetical protein | SAMN05421827_10634 | Not Available | - | 2158047 - 2158640 | 22358.6 |
| arac-type dna-binding protein | SAMN05421827_10635 | Not Available | + | 2158823 - 2159686 | 32847.2 |
| hypothetical protein | SAMN05421827_10636 | Not Available | - | 2159693 - 2160439 | 29149.2 |
| dna polymerase-3 subunit gamma/tau | SAMN05421827_10637 | Not Available | + | 2160576 - 2162402 | 68516.9 |
| hypothetical protein | SAMN05421827_10638 | Not Available | - | 2162479 - 2162886 | 15267.7 |
| hypothetical protein | SAMN05421827_10640 | Not Available | + | 2163154 - 2163675 | 20114.2 |
| isocitrate dehydrogenase | SAMN05421827_10641 | Not Available | - | 2163985 - 2166204 | 79778.9 |
| ankyrin repeat-containing protein | SAMN05421827_10646 | Not Available | + | 2167055 - 2168257 | 45540.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.