Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter terrae
Accession NumberFNCH00000000.1
Gene Summary
Adenine Count
1757318 bp
Thymine Count
1765928 bp
Guanine Count
1120783 bp
Cytosine Count
1109922 bp
Genome Length
5755101 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421827_10622 | Not Available | - | 2148631 - 2149116 | 18704.4 |
| hypothetical protein | SAMN05421827_10623 | Not Available | + | 2149167 - 2149646 | 18341.6 |
| uncharacterized conserved protein ycii, contains a putative active-site phosphohistidine | SAMN05421827_10624 | Not Available | + | 2149651 - 2149938 | 11115.6 |
| asma family protein | SAMN05421827_10625 | Not Available | + | 2150031 - 2152448 | 89078.9 |
| monofunctional biosynthetic peptidoglycan transglycosylase | SAMN05421827_10626 | Not Available | - | 2152523 - 2153251 | 27774.3 |
| protein of unknown function | SAMN05421827_10627 | Not Available | + | 2153371 - 2154267 | 34247.9 |
| hypothetical protein | SAMN05421827_10628 | Not Available | + | 2154298 - 2154996 | 24916.9 |
| hypothetical protein | SAMN05421827_10629 | Not Available | + | 2155508 - 2156641 | 43447.5 |
| large subunit ribosomal protein l9 | SAMN05421827_10630 | Not Available | - | 2156731 - 2157174 | 16029.4 |
| small subunit ribosomal protein s18 | SAMN05421827_10631 | Not Available | - | 2157187 - 2157450 | 10240.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.