Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter terrae
Accession NumberFNCH00000000.1
Gene Summary
Adenine Count
1757318 bp
Thymine Count
1765928 bp
Guanine Count
1120783 bp
Cytosine Count
1109922 bp
Genome Length
5755101 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| outer membrane receptor proteins, mostly fe transport | SAMN05421827_1066 | Not Available | + | 2138036 - 2140450 | 89899.0 |
| putative acetyltransferase | SAMN05421827_1067 | Not Available | - | 2140533 - 2141015 | 17537.3 |
| hypothetical protein | SAMN05421827_1068 | Not Available | + | 2141120 - 2141404 | 10348.2 |
| hypothetical protein | SAMN05421827_1069 | Not Available | + | 2141460 - 2142071 | 22107.2 |
| peptidase family s41 | SAMN05421827_10610 | Not Available | - | 2142139 - 2143737 | 58050.4 |
| activator of hsp90 atpase homolog 1-like protein | SAMN05421827_10611 | Not Available | + | 2144099 - 2144524 | 16250.3 |
| Trna-phe | Not Available | Not Available | + | 2144609 - 2144681 | Not Available |
| Trna-phe | Not Available | Not Available | + | 2144953 - 2145025 | Not Available |
| 4fe-4s dicluster domain-containing protein | SAMN05421827_10614 | Not Available | + | 2145254 - 2146549 | 48562.5 |
| cysteine-rich domain-containing protein | SAMN05421827_10615 | Not Available | + | 2146654 - 2147442 | 28839.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.