Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter terrae
Accession NumberFNCH00000000.1
Gene Summary
Adenine Count
1757318 bp
Thymine Count
1765928 bp
Guanine Count
1120783 bp
Cytosine Count
1109922 bp
Genome Length
5755101 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glucokinase | SAMN05421827_105226 | Not Available | - | 2109235 - 2110110 | 31690.1 |
| alpha-1,2-mannosidase, putative | SAMN05421827_105227 | Not Available | - | 2110177 - 2112474 | 87127.0 |
| starch-binding associating with outer membrane | SAMN05421827_105228 | Not Available | - | 2112938 - 2114605 | 62382.2 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05421827_105229 | Not Available | - | 2114592 - 2117642 | 112225.0 |
| laci family transcriptional regulator | SAMN05421827_105230 | Not Available | - | 2117970 - 2118974 | 37573.3 |
| lipid-a-disaccharide synthase | SAMN05421827_105231 | Not Available | - | 2119269 - 2120372 | 41403.8 |
| hypothetical protein | SAMN05421827_105232 | Not Available | - | 2120543 - 2120812 | 10011.5 |
| 5'-nucleotidase | SAMN05421827_105233 | Not Available | - | 2120821 - 2121696 | 31596.9 |
| predicted zn-dependent peptidase | SAMN05421827_105234 | Not Available | + | 2121882 - 2124815 | 109459.0 |
| putative sos response-associated peptidase yedk | SAMN05421827_105235 | Not Available | - | 2124964 - 2125644 | 25531.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.