Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter terrae
Accession NumberFNCH00000000.1
Gene Summary
Adenine Count
1757318 bp
Thymine Count
1765928 bp
Guanine Count
1120783 bp
Cytosine Count
1109922 bp
Genome Length
5755101 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| secondary thiamine-phosphate synthase enzyme | SAMN05421827_105216 | Not Available | + | 2096220 - 2096642 | 15964.0 |
| membrane protein | SAMN05421827_105217 | Not Available | - | 2096645 - 2097613 | 35178.4 |
| hypothetical protein | SAMN05421827_105218 | Not Available | - | 2097762 - 2099081 | 48027.8 |
| doxx-like family protein | SAMN05421827_105219 | Not Available | - | 2099294 - 2099551 | 8870.06 |
| lia operon protein liaf | SAMN05421827_105220 | Not Available | - | 2100002 - 2100391 | 14839.6 |
| ribose 5-phosphate isomerase a | SAMN05421827_105221 | Not Available | - | 2100658 - 2101347 | 24161.2 |
| cytochrome c | SAMN05421827_105222 | Not Available | - | 2102256 - 2104217 | 72695.8 |
| protein of unknown function | SAMN05421827_105223 | Not Available | - | 2104229 - 2105632 | 50681.9 |
| alpha-1,2-mannosidase, putative | SAMN05421827_105224 | Not Available | - | 2105717 - 2108005 | 85813.4 |
| peptidase | SAMN05421827_105225 | Not Available | - | 2108043 - 2108714 | 25510.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.