Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter terrae
Accession NumberFNCH00000000.1
Gene Summary
Adenine Count
1757318 bp
Thymine Count
1765928 bp
Guanine Count
1120783 bp
Cytosine Count
1109922 bp
Genome Length
5755101 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| trna pseudouridine55 synthase | SAMN05421827_105206 | Not Available | + | 2087887 - 2088618 | 27394.9 |
| uncharacterized membrane-anchored protein yitt, contains duf161 and duf2179 domains | SAMN05421827_105207 | Not Available | + | 2088615 - 2089475 | 31133.9 |
| riboflavin kinase / fmn adenylyltransferase | SAMN05421827_105208 | Not Available | + | 2089573 - 2090559 | 36754.2 |
| hypothetical protein | SAMN05421827_105209 | Not Available | - | 2090556 - 2090816 | 9761.12 |
| hypothetical protein | SAMN05421827_105210 | Not Available | - | 2090817 - 2090963 | 5332.37 |
| hypothetical protein | SAMN05421827_105211 | Not Available | - | 2090945 - 2091196 | 9387.35 |
| hypothetical protein | SAMN05421827_105212 | Not Available | - | 2091613 - 2091726 | 4234.24 |
| monovalent cation:h+ antiporter-2, cpa2 family | SAMN05421827_105213 | Not Available | + | 2091736 - 2093949 | 81599.1 |
| predicted membrane protein | SAMN05421827_105214 | Not Available | + | 2094064 - 2095098 | 39778.5 |
| predicted nuclease of restriction endonuclease-like (recb) superfamily, duf1016 family | SAMN05421827_105215 | Not Available | + | 2095156 - 2096214 | 41766.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.