Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter terrae
Accession NumberFNCH00000000.1
Gene Summary
Adenine Count
1757318 bp
Thymine Count
1765928 bp
Guanine Count
1120783 bp
Cytosine Count
1109922 bp
Genome Length
5755101 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glycoside/pentoside/hexuronide:cation symporter, gph family | SAMN05421827_105196 | Not Available | + | 2073134 - 2074468 | 49014.2 |
| starch-binding associating with outer membrane | SAMN05421827_105197 | Not Available | - | 2074905 - 2076617 | 62573.9 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05421827_105198 | Not Available | - | 2076636 - 2079866 | 117152.0 |
| atp-dependent rna helicase rhle | SAMN05421827_105199 | Not Available | + | 2080450 - 2081748 | 47874.3 |
| leucyl-trna synthetase | SAMN05421827_105200 | Not Available | - | 2081949 - 2084777 | 108600.0 |
| hypothetical protein | SAMN05421827_105201 | Not Available | + | 2085036 - 2085239 | 7528.51 |
| hypothetical protein | SAMN05421827_105202 | Not Available | - | 2085143 - 2085598 | 16964.4 |
| cell division transport system permease protein | SAMN05421827_105203 | Not Available | + | 2085772 - 2086650 | 32716.6 |
| protein of unknown function | SAMN05421827_105204 | Not Available | + | 2086650 - 2086877 | 8251.56 |
| undecaprenyl-diphosphatase | SAMN05421827_105205 | Not Available | + | 2086916 - 2087752 | 30894.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.