Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter terrae
Accession NumberFNCH00000000.1
Gene Summary
Adenine Count
1757318 bp
Thymine Count
1765928 bp
Guanine Count
1120783 bp
Cytosine Count
1109922 bp
Genome Length
5755101 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| acyl-coa dehydrogenase | SAMN05421827_105186 | Not Available | - | 2051948 - 2053036 | 40307.9 |
| nicotinamide mononucleotide transporter | SAMN05421827_105187 | Not Available | - | 2053057 - 2053716 | 25412.7 |
| topoisomerase-4 subunit a | SAMN05421827_105188 | Not Available | - | 2054071 - 2056971 | 108514.0 |
| glpgli family protein | SAMN05421827_105189 | Not Available | - | 2057796 - 2059478 | 62155.1 |
| cytidine deaminase | SAMN05421827_105190 | Not Available | - | 2059658 - 2060146 | 18013.6 |
| family of unknown function | SAMN05421827_105191 | Not Available | + | 2060184 - 2065283 | 187284.0 |
| outer membrane protein assembly factor bama | SAMN05421827_105192 | Not Available | + | 2065267 - 2067582 | 87737.8 |
| membrane protein | SAMN05421827_105193 | Not Available | + | 2067590 - 2068612 | 37170.3 |
| topoisomerase-4 subunit b | SAMN05421827_105194 | Not Available | - | 2069118 - 2070989 | 70826.4 |
| basic amino acid/polyamine antiporter, apa family | SAMN05421827_105195 | Not Available | + | 2071512 - 2072855 | 48592.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.