Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter terrae
Accession NumberFNCH00000000.1
Gene Summary
Adenine Count
1757318 bp
Thymine Count
1765928 bp
Guanine Count
1120783 bp
Cytosine Count
1109922 bp
Genome Length
5755101 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| porphobilinogen synthase | SAMN05421827_105163 | Not Available | - | 2033779 - 2034747 | 35897.1 |
| hydroxymethylbilane synthase | SAMN05421827_105164 | Not Available | - | 2034945 - 2036525 | 58685.6 |
| glutamyl-trna reductase | SAMN05421827_105165 | Not Available | - | 2036877 - 2038103 | 46596.5 |
| uncharacterized membrane protein | SAMN05421827_105166 | Not Available | + | 2038240 - 2038629 | 15272.4 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN05421827_105167 | Not Available | + | 2038825 - 2039649 | 30381.1 |
| miniconductance mechanosensitive channel | SAMN05421827_105168 | Not Available | - | 2039763 - 2041037 | 49030.8 |
| (e)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase | SAMN05421827_105169 | Not Available | - | 2041224 - 2043203 | 73570.8 |
| hypothetical protein | SAMN05421827_105170 | Not Available | - | 2043256 - 2043645 | 14411.9 |
| uncharacterized membrane protein yckc, rdd family | SAMN05421827_105174 | Not Available | - | 2043821 - 2044432 | 23017.2 |
| hypothetical protein | SAMN05421827_105175 | Not Available | - | 2044528 - 2045505 | 36351.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.