Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter terrae
Accession NumberFNCH00000000.1
Gene Summary
Adenine Count
1757318 bp
Thymine Count
1765928 bp
Guanine Count
1120783 bp
Cytosine Count
1109922 bp
Genome Length
5755101 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05421827_105153 | Not Available | - | 2024900 - 2025433 | 20373.8 |
| hypothetical protein | SAMN05421827_105154 | Not Available | - | 2025864 - 2027021 | 44776.3 |
| putative membrane protein | SAMN05421827_105155 | Not Available | - | 2027206 - 2027766 | 21577.5 |
| predicted abc-type atpase | SAMN05421827_105156 | Not Available | - | 2027763 - 2028506 | 28793.6 |
| hypothetical protein | SAMN05421827_105157 | Not Available | - | 2028506 - 2028739 | 8917.02 |
| uroporphyrinogen decarboxylase | SAMN05421827_105158 | Not Available | - | 2028785 - 2029810 | 38192.4 |
| hypothetical protein | SAMN05421827_105159 | Not Available | - | 2030016 - 2030531 | 19759.1 |
| two-component system, ompr family, alkaline phosphatase synthesis response regulator phop | SAMN05421827_105160 | Not Available | - | 2030531 - 2031235 | 27282.1 |
| his kinase a (phospho-acceptor) domain-containing protein | SAMN05421827_105161 | Not Available | - | 2031244 - 2032110 | 32788.1 |
| glutamate-1-semialdehyde 2,1-aminomutase | SAMN05421827_105162 | Not Available | - | 2032233 - 2033603 | 49781.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.